Commit Graph

581 Commits (c105d014b28ab681a9c356800f64e588843fd92a)

Author SHA1 Message Date
Mohamad Chaarawi b3663bd29a add sleep depending on MPI rank to avoid all ranks calling daos_fini()
at once (issue with PSM2).

Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
2019-08-14 13:32:51 +00:00
Mohamad Chaarawi 1320aa279c add some barriers before cont close and destroy to make sure all
ranks are done.

Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
2019-08-12 16:04:20 +00:00
Mohamad Chaarawi 8cb878507e Add dfs chunk_size and oclass options.
update dfs_remove for API change.

Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
2019-08-12 14:25:05 +00:00
Julian Kunkel 9464fa79f2
Merge pull request #173 from ax3l/fix-earlyFree
Fix Last Free
2019-08-10 16:31:22 +01:00
Axel Huebl 5271198eb3 Travis CI: Fix HDF5 Build
Fix the CI.
2019-08-06 10:36:35 -07:00
Axel Huebl 70e8b13d1d
Fix Last Free 2019-08-04 18:27:20 -05:00
Julian Kunkel da5f091afc
Merge pull request #169 from ax3l/fix-singleRankHeapBufferOverflow
Fix: Heap Buffer Overflow
2019-08-03 09:20:15 +01:00
Julian Kunkel 5e6a03442f
Merge pull request #170 from ax3l/fix-someMemleaks
Fix Some Memory Leaks; Thanks.
2019-08-03 09:19:08 +01:00
Julian Kunkel b49b21a301
Merge pull request #167 from hpc/feature-verify-mdtest
Feature verify mdtest
2019-08-03 09:17:35 +01:00
Julian M. Kunkel 361a3261d1 Updated test patterns 2019-08-03 09:15:34 +01:00
Julian M. Kunkel c4ff3d7c4e Trivial fix for #168 2019-08-03 09:12:48 +01:00
Mohamad Chaarawi f16ef9ace5 update dfs_lookup() call for extra parameter.
Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
2019-08-03 05:07:13 +00:00
Axel Huebl b72b51be48
Fix: Heap Buffer Overflow
Fix a memory violation when run in serial.
2019-08-02 23:34:13 -05:00
Axel Huebl bfff0df8fd
Fix Some Memory Leaks
Fixing some memory leaks :)
2019-08-02 23:33:01 -05:00
Glenn K. Lockwood 4b2cd69ef7
Merge pull request #171 from ax3l/fix-ciHDF5
Travis CI: Fix HDF5 Build
2019-08-02 22:53:23 -05:00
Axel Huebl f89f338734
Travis CI: Fix HDF5 Build
Fix the CI.
2019-08-02 19:35:14 -05:00
Glenn K. Lockwood a0c5dcec89
Merge pull request #166 from hpc/feature-stonewall-perf-report
Feature stonewall perf report
2019-08-02 08:38:37 -05:00
Osamu Tatebe b1b66962ac incorrect warning 2019-08-02 13:03:59 +09:00
Julian M. Kunkel cf56715a5a Make sure that each read buffer contains an invalid first byte. 2019-08-01 18:33:44 +01:00
Julian M. Kunkel ce1ae750f6 MDtest: Support to verify the read operation with a default pattern. 2019-08-01 18:29:32 +01:00
Julian M. Kunkel df8355a9bc Added output of mdtest stonewall timer. 2019-08-01 17:57:45 +01:00
Julian M. Kunkel 061b5a860f Backmerged: New option: print rate AND time; improves debugging. 2019-08-01 17:54:11 +01:00
Julian M. Kunkel 6c0fadc2a9 Include performance when stonewall is hit to output. 2019-08-01 17:20:01 +01:00
Julian Kunkel b686b6c26a
Merge pull request #162 from johnbent/master
Fixed shift.  Also cleaned up output messages
2019-08-01 15:21:26 +01:00
John Bent 3890b71b54 Fixed issues and followed suggestions from Glenn's review of the PR 2019-08-01 09:42:03 +09:00
Mohamad Chaarawi 92939e4fbd update for DAOS API changes
Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
2019-07-31 17:22:20 +00:00
Glenn K. Lockwood b025d6bdb3
Merge pull request #153 from glennklockwood/docfixes
Updated documentation
2019-07-30 19:29:37 -05:00
John Bent a3c37808da Made FAIL take variable args so we can pass printf like args to it 2019-07-28 11:17:11 -06:00
John Bent 0ffec67d2b Following Julian's suggestion about better naming 2019-07-28 10:25:42 -06:00
John Bent b2d486f749 Followed Andreas suggestion to replace escape double quotes within printf's with single quotes 2019-07-28 10:07:03 -06:00
John Bent 168a407793 Fixed inconsistent spacing that Andreas commented upon 2019-07-28 09:55:00 -06:00
John Bent 629ff810b7 Got IOR shifting to work regardless of whether node/task mapping is round-robin or contiguous 2019-07-27 15:27:20 -06:00
John Bent d69957e55b Final changes cleaning up the output messages 2019-07-27 14:31:49 -06:00
John Bent e767ef3de9 Remove extraneous print_help function that was causing people to have to edit the same string in two different locations 2019-07-27 13:26:39 -06:00
John Bent f6491fcd37 Cleaned up the verbose messages by creating a macro and a function 2019-07-27 13:22:15 -06:00
John Bent 9d6480d46e Fixed bug in the nstride calculation where only 0 was computing it correctly. Had to bcast it out 2019-07-27 11:30:07 -06:00
John Bent 945487f743 Better debug message when stat fails 2019-07-27 09:20:20 -06:00
John Bent 524d053be1 Making shift work in mdtest as well as it works in IOR and on a per-node basis.
Also added printing the nodemap so we can check the allocation.
2019-07-26 08:55:24 -06:00
John Bent 7981fc70b1 Changed the behavior of shift in mdtest to mimic that in IOR so that it shifts by _entire nodes_ not by ranks. 2019-07-25 19:18:52 -06:00
Julian M. Kunkel 76f6bb6e42 Abort when invalid options are set. 2019-07-24 00:29:58 +01:00
Mohamad Chaarawi 1c640716c7 Use MPI Info object for all MPI_File_open calls.
Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
2019-07-08 21:31:00 +00:00
Mohamad Chaarawi ad61fdd89c add proper check for DAOS object class and exit if unknown.
Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
2019-07-08 18:18:24 +00:00
Mohamad Chaarawi 04e3df0d42 use the daos provided function for name to object class
Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
2019-07-08 17:02:30 +00:00
Mohamad Chaarawi 52ed766df4 update DAOS and DFS drivers to new DAOS API changes.
Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
2019-07-08 15:33:06 +00:00
Julian Kunkel 749a06dcbb
Merge pull request #161 from wkliao/ncmpi_hint
showHints: allow NCMPI to print I/O hints
2019-06-29 10:50:29 +01:00
Wei-keng Liao 3eb0f86640 Function ncmpi_get_file_info was first introduced in
PnetCDF version 1.2.0. Check PnetCDF library version,
so printing MPI-IO hints can be enabled for NCMPI.
2019-06-28 17:40:35 -05:00
Mohamad Chaarawi 9f9730d6fd should abort on daos init if pool/cont/svcl not specified.
Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
2019-06-28 16:20:56 +00:00
Mohamad Chaarawi 2ae7c29de2 cache the parent dir in a hashtable so we don't have to do a lookup
on every access.

Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
2019-06-27 21:31:07 +00:00
Mohamad Chaarawi 960005351d update DAOS and DFS markings.
Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
2019-06-25 22:41:30 +00:00
Mohamad Chaarawi 262d35d87e - Merge branch 'master' into daos-devel
- fix bugs with cont destroy.
- add destroy option to DFS driver
- share pool and container handle with DFS driver, and allow multi rank access

Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>

Conflicts:
	src/ior.c
	src/mdtest.c
	src/option.c
	src/parse_options.c
2019-06-24 21:26:15 +00:00