Commit Graph

557 Commits (852ee3e40e8e32abf354cc68738e5e3f9e43ae23)

Author SHA1 Message Date
Julian M. Kunkel 852ee3e40e AIORI POSIX use internal debug macros, include errno in msg. 2021-01-21 11:06:13 +00:00
Julian Kunkel d5f5cf974d
Merge pull request #318 from hpc/fix-comm
Refactoring: remove global comm_world communicator from utilities.c
2021-01-20 18:25:53 +00:00
Julian Kunkel 9e0a8c44d5
IOR: move verbose output of detailed errors to verbosity level 1. (#315)
IOR by default outputs the numbers of errors.
Reason: The amount of error messages can be overwhelming, particularly in a parallel program (Gigabytes...).
One -v increases the verbosity level to provide the extra details without adding too many other messages.
2021-01-20 15:06:45 +00:00
Julian M. Kunkel f345a78046 Removed dependency. 2021-01-20 15:00:33 +00:00
Julian M. Kunkel 970c5ef139 Adjust complex tests for changed -z behavior. 2021-01-20 14:57:21 +00:00
Julian M. Kunkel 40c6d97e72 Replaced MPI_COMM_WORLD where needed with testComm. 2021-01-20 14:35:06 +00:00
Julian M. Kunkel e4120d600d Reduce the dependency to global MPI Communicator 2021-01-20 14:06:05 +00:00
Julian Kunkel 58fbefbd33
Bugfix IOR offsetting (fix before was incomplete). (#317) 2021-01-19 23:19:01 +00:00
Julian Kunkel 19ad73568a
Bugfix ior stonewalling case. (#316)
* Bugfix ior stonewalling case.
2021-01-19 22:28:34 +00:00
Julian Kunkel 3daf7a2d0f
Bugfix: valgrind memory issues (#314) 2021-01-19 21:23:30 +00:00
Mohamad Chaarawi fa316d5d24
dfs: conditionally compile out svcl setting (#313)
The SVCL argument is being removed from the DAOS API, so conditionally
compile out while maintaining backwards compatibility to versions where
 it's still required.
2021-01-19 13:43:01 +00:00
Julian Kunkel b2089514e3
MDTest calculate min/max/mean across iterations #300. (#312)
The calculation per iteration first computes the value of the slowest process, i.e., highest time or lowest rate. This is then the value for the iteration.
Secondly, calculate the min/max/mean across iterations.
For tree operations, the value is identical to previous as only Rank 0 is involved.
2021-01-18 21:30:16 +00:00
Julian Kunkel 33b70ecbc8
Fix MDTest multidir option to work with stonewall file. (#308) 2021-01-14 17:38:11 +00:00
Julian Kunkel 4a96436928
MDTest convert FATAL to WARN (#307) 2021-01-14 16:41:56 +00:00
Julian Kunkel d339caa501
Updated test (illustration of an empty test) and distclean for make distcheck #304 (#305)
Resolves #304
2021-01-04 10:50:38 -08:00
Julian M. Kunkel 21bf5a5a12 NCMPI ported to current ADIO. Fixed autoconf #303. 2020-12-25 16:49:04 +00:00
Julian Kunkel 8de13884a7
HDFS module ported to current AIORI API and improved (#302)
* HDFS module ported to current AIORI API and extended
* Added instructions how to build and run with a HDFS.
* Replaced read with pread to support offsets.
* Implemented HDFS MDTest API
* Improved sync semantics
2020-12-23 11:51:31 +00:00
Mohamad Chaarawi 6675cd50bf aiori-DFS: stat should not be fatal
ior now expects stat to not be fatal. update the DFS driver to not
exit if stat fails since the file can simply not exist.

Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
2020-12-16 15:41:58 +00:00
Frank 0bd52884e8
added region and location to libs3 (#295)
* added region and location to libs3
2020-12-11 13:05:24 +00:00
Julian Kunkel fbee4139d8
Merge pull request #292 from ofaaland/b-fix-mpi-checkf
Do not execute functions twice in MPI_CHECKF
2020-12-04 09:20:21 +00:00
Julian M. Kunkel 69e006dd89 IOR clarify return API. 2020-12-03 21:07:45 +00:00
Julian M. Kunkel 073da08292 IOR: print overwrite check only if a write operation is requested. 2020-12-03 20:54:51 +00:00
Olaf Faaland 231868505d Do not execute functions twice in MPI_CHECKF
Assigning MPI_STATUS to a local variable and then referring to the
local will ensure that the same value is used in both the conditional
expression and the call to MPI_Error_string.

Otherwise, when MPI_STATUS is a function call, like

  MPI_CHECKF(fubar(), "%s", "error in fubar");

fubar() is called twice.  If there are underlying intermittent errors,
the error code/message for the first call is lost, with confusing output
like this:

  read      2206.18    17.27      145.93      262144     131072
  0.272595   291.88     0.290829   292.41
  ERROR: cannot access explicit, noncollective, MPI MPI_SUCCESS: no errors, (aiori-MPIIO.c:451)
2020-12-03 12:21:06 -08:00
Julian Kunkel a8ab766483
Merge pull request #270 from hpc/fix-offset-integration
Fix offset integration
2020-12-03 12:08:53 +00:00
Julian Kunkel 09d2c3511b
Merge pull request #289 from hpc/fix-ior-no-warn
IOR add warning if file exists #273. To stop on warnings, use existing flag --warningAsErrors
2020-12-02 10:41:44 +00:00
Julian Kunkel b417505dfd
Merge branch 'master' into fix-modules 2020-12-02 10:21:59 +00:00
Julian M. Kunkel f71a144b19 IOR raise warning for existing file once if not filePerProc. 2020-12-02 10:14:28 +00:00
Mohamad Chaarawi 938cf2771b DFS: make use of collective open to share file handle
- remove un-needed libdaos_common lib since DAOS driver is removed
- use default container object class when it's not specified

Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
2020-12-01 21:36:25 +00:00
Julian M. Kunkel da03ae5c9f IOR add warning if file exists #273. To stop on warnings, use existing flag --warningAsErrors 2020-12-01 18:24:09 +00:00
Julian Kunkel 691324f17b
Merge pull request #287 from hpc/fix-warning
Fix compiler issue with redefinition via typedef.
2020-12-01 17:44:14 +00:00
Julian M. Kunkel 9dcf9f79e4 Moved barriers to right location. 2020-12-01 14:47:57 +00:00
Julian M. Kunkel 546eb05d15 Rudimentary support for stonewall added, addresses #261. 2020-12-01 14:45:07 +00:00
Julian M. Kunkel 5825dbae35 Provide new option randomPrefill for random (-z access only) that prefill the file with the specified blocksize, e.g., 2m. See issue #270.
This option works so far only without stonewalling!
2020-12-01 13:58:40 +00:00
Richard Mohr 41184c69e2 mdtest: fix reference to unique_dir_per_task for builds --with-lustre 2020-12-01 01:22:31 -05:00
Julian M. Kunkel ae06908a93 Merge branch 'master' into fix-mdtest-iter 2020-11-30 14:16:41 +00:00
Julian M. Kunkel 11c784c8bd Integrate review feedback. 2020-11-28 10:40:41 +00:00
Julian M. Kunkel ae23523a70 Integrate review feedback 2020-11-28 10:34:20 +00:00
Julian M. Kunkel 5799e4ef3a MDTest remove unnede variable. 2020-11-27 18:02:14 +00:00
Julian M. Kunkel fd51654393 Readd check for mdtest for now. 2020-11-27 17:51:31 +00:00
Julian M. Kunkel fbf976351a MDTest refactoring: move all global static variables into the global static structure. 2020-11-27 17:49:45 +00:00
Julian M. Kunkel ae8a11b42f MDTest updated stonewall check. 2020-11-27 15:35:32 +00:00
Julian M. Kunkel 7542e75c82 MDTest ignore verbose potential format overflows to be able to spot real errors. 2020-11-27 15:23:32 +00:00
Julian M. Kunkel 980ab1dc97 Lustre stripping: Fix default value such that Lustre striping is only set if anything is changed. 2020-11-26 15:56:34 +00:00
Julian M. Kunkel 4377aebcf8 Bugfix MDTest calculation of multiple iterations was incorrect. 2020-11-26 12:48:11 +00:00
Julian M. Kunkel ad6dfc5e63 Allow MDTest to print per proc. 2020-11-25 09:50:26 +00:00
Julian M. Kunkel 02a47085ec Bugfix: suboptimal name mapping was leading to accidential deletes in md-workbench. 2020-11-22 12:01:12 +00:00
Julian M. Kunkel b5891141d8 Move checks before inititalization.
Add simple validation for S3.
2020-11-22 11:43:42 +00:00
Julian Kunkel 5d489064d8
Merge pull request #271 from hpc/fix-statvfs
Remove duplicated functionality between mdtest and IOR.
2020-11-13 09:24:24 +00:00
Julian Kunkel 13f9721dbc
Merge pull request #267 from hpc/feature-md-workbench
Feature: md-workbench
2020-11-10 19:05:20 +00:00
Julian M. Kunkel 277f380139 Remove duplicated functionality between mdtest and IOR.
Refactored the ShowFileSystemSize function.
2020-11-09 16:23:34 +00:00