Commit Graph

541 Commits (e579531970551fe6358598b4d5d52db4653d8b9e)

Author SHA1 Message Date
Julian Kunkel 8de13884a7
HDFS module ported to current AIORI API and improved (#302)
* HDFS module ported to current AIORI API and extended
* Added instructions how to build and run with a HDFS.
* Replaced read with pread to support offsets.
* Implemented HDFS MDTest API
* Improved sync semantics
2020-12-23 11:51:31 +00:00
Mohamad Chaarawi 6675cd50bf aiori-DFS: stat should not be fatal
ior now expects stat to not be fatal. update the DFS driver to not
exit if stat fails since the file can simply not exist.

Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
2020-12-16 15:41:58 +00:00
Frank 0bd52884e8
added region and location to libs3 (#295)
* added region and location to libs3
2020-12-11 13:05:24 +00:00
Julian Kunkel fbee4139d8
Merge pull request #292 from ofaaland/b-fix-mpi-checkf
Do not execute functions twice in MPI_CHECKF
2020-12-04 09:20:21 +00:00
Julian M. Kunkel 69e006dd89 IOR clarify return API. 2020-12-03 21:07:45 +00:00
Julian M. Kunkel 073da08292 IOR: print overwrite check only if a write operation is requested. 2020-12-03 20:54:51 +00:00
Olaf Faaland 231868505d Do not execute functions twice in MPI_CHECKF
Assigning MPI_STATUS to a local variable and then referring to the
local will ensure that the same value is used in both the conditional
expression and the call to MPI_Error_string.

Otherwise, when MPI_STATUS is a function call, like

  MPI_CHECKF(fubar(), "%s", "error in fubar");

fubar() is called twice.  If there are underlying intermittent errors,
the error code/message for the first call is lost, with confusing output
like this:

  read      2206.18    17.27      145.93      262144     131072
  0.272595   291.88     0.290829   292.41
  ERROR: cannot access explicit, noncollective, MPI MPI_SUCCESS: no errors, (aiori-MPIIO.c:451)
2020-12-03 12:21:06 -08:00
Julian Kunkel a8ab766483
Merge pull request #270 from hpc/fix-offset-integration
Fix offset integration
2020-12-03 12:08:53 +00:00
Julian Kunkel 09d2c3511b
Merge pull request #289 from hpc/fix-ior-no-warn
IOR add warning if file exists #273. To stop on warnings, use existing flag --warningAsErrors
2020-12-02 10:41:44 +00:00
Julian Kunkel b417505dfd
Merge branch 'master' into fix-modules 2020-12-02 10:21:59 +00:00
Julian M. Kunkel f71a144b19 IOR raise warning for existing file once if not filePerProc. 2020-12-02 10:14:28 +00:00
Mohamad Chaarawi 938cf2771b DFS: make use of collective open to share file handle
- remove un-needed libdaos_common lib since DAOS driver is removed
- use default container object class when it's not specified

Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
2020-12-01 21:36:25 +00:00
Julian M. Kunkel da03ae5c9f IOR add warning if file exists #273. To stop on warnings, use existing flag --warningAsErrors 2020-12-01 18:24:09 +00:00
Julian Kunkel 691324f17b
Merge pull request #287 from hpc/fix-warning
Fix compiler issue with redefinition via typedef.
2020-12-01 17:44:14 +00:00
Julian M. Kunkel 9dcf9f79e4 Moved barriers to right location. 2020-12-01 14:47:57 +00:00
Julian M. Kunkel 546eb05d15 Rudimentary support for stonewall added, addresses #261. 2020-12-01 14:45:07 +00:00
Julian M. Kunkel 5825dbae35 Provide new option randomPrefill for random (-z access only) that prefill the file with the specified blocksize, e.g., 2m. See issue #270.
This option works so far only without stonewalling!
2020-12-01 13:58:40 +00:00
Richard Mohr 41184c69e2 mdtest: fix reference to unique_dir_per_task for builds --with-lustre 2020-12-01 01:22:31 -05:00
Julian M. Kunkel ae06908a93 Merge branch 'master' into fix-mdtest-iter 2020-11-30 14:16:41 +00:00
Julian M. Kunkel 11c784c8bd Integrate review feedback. 2020-11-28 10:40:41 +00:00
Julian M. Kunkel ae23523a70 Integrate review feedback 2020-11-28 10:34:20 +00:00
Julian M. Kunkel 5799e4ef3a MDTest remove unnede variable. 2020-11-27 18:02:14 +00:00
Julian M. Kunkel fd51654393 Readd check for mdtest for now. 2020-11-27 17:51:31 +00:00
Julian M. Kunkel fbf976351a MDTest refactoring: move all global static variables into the global static structure. 2020-11-27 17:49:45 +00:00
Julian M. Kunkel ae8a11b42f MDTest updated stonewall check. 2020-11-27 15:35:32 +00:00
Julian M. Kunkel 7542e75c82 MDTest ignore verbose potential format overflows to be able to spot real errors. 2020-11-27 15:23:32 +00:00
Julian M. Kunkel 980ab1dc97 Lustre stripping: Fix default value such that Lustre striping is only set if anything is changed. 2020-11-26 15:56:34 +00:00
Julian M. Kunkel 4377aebcf8 Bugfix MDTest calculation of multiple iterations was incorrect. 2020-11-26 12:48:11 +00:00
Julian M. Kunkel ad6dfc5e63 Allow MDTest to print per proc. 2020-11-25 09:50:26 +00:00
Julian M. Kunkel 02a47085ec Bugfix: suboptimal name mapping was leading to accidential deletes in md-workbench. 2020-11-22 12:01:12 +00:00
Julian M. Kunkel b5891141d8 Move checks before inititalization.
Add simple validation for S3.
2020-11-22 11:43:42 +00:00
Julian Kunkel 5d489064d8
Merge pull request #271 from hpc/fix-statvfs
Remove duplicated functionality between mdtest and IOR.
2020-11-13 09:24:24 +00:00
Julian Kunkel 13f9721dbc
Merge pull request #267 from hpc/feature-md-workbench
Feature: md-workbench
2020-11-10 19:05:20 +00:00
Julian M. Kunkel 277f380139 Remove duplicated functionality between mdtest and IOR.
Refactored the ShowFileSystemSize function.
2020-11-09 16:23:34 +00:00
Julian M. Kunkel 306598db67 Bugfix memory issue in global options. 2020-11-06 11:40:31 +00:00
Julian M. Kunkel a59e98d7a6 Add error to indicate changed behavior to users 2020-11-06 10:39:16 +00:00
Julian M. Kunkel af0753d8ad Random: last modifications. 2020-11-06 10:27:11 +00:00
Julian M. Kunkel a0e5e297d6 Create random for one block (1 segment) only to be repeated. 2020-11-06 09:52:35 +00:00
Julian M. Kunkel ad985af763 Location problem on non Linux systems. 2020-11-06 09:30:59 +00:00
otatebe 0e91769328
aiori-Gfarm: sequel to #262 - sync interface (#269)
* aiori-Gfarm: update to the new aiori interface

* aiori-Gfarm: Gfarm_sync
2020-11-06 09:15:39 +00:00
Julian M. Kunkel 2d79efc0c5 Fix wait issue on MacOS 2020-11-05 19:13:08 +00:00
Julian M. Kunkel 3ee3e9ad5c Integrated sequential code into the benchmark main loop.
A bit ugly but shows that the code logic hasn't changed.
2020-11-05 14:00:09 +00:00
Julian M. Kunkel 75c08386a4 Bugfix porting error for performance stats. 2020-11-04 20:47:30 +00:00
Julian M. Kunkel c0ffdf44d0 Workbench API improved. 2020-11-04 20:25:27 +00:00
Julian M. Kunkel d9c74af8f3 Fix (accidently rename of option) 2020-11-04 19:27:39 +00:00
Julian M. Kunkel b5dfeea82a Remove output for the API. 2020-11-04 18:04:46 +00:00
Julian Kunkel fb66e77072
Enable random seed to be stored. (#268) 2020-11-04 13:47:35 +00:00
Julian M. Kunkel 4e452766b9 Enable random seed to be stored. 2020-11-04 12:48:46 +00:00
Julian M. Kunkel e1dd3103cf Fix make dist for md-workbench. 2020-11-03 10:52:45 +00:00
Mohamad Chaarawi cb397242f9
DAOS backend cleanup (#266)
- remove legacy DAOS driver & update Readme.
- update configure options to remove cart requirement
- Optimize DFS file get_size

Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
2020-11-03 10:01:09 +00:00