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502 Commits (12284ae04af584e293dde105a4b2a564d551395b)

Author SHA1 Message Date
Mohamad Chaarawi 12284ae04a Add latency and iops numbers to each iteration. 
- Latency reported is computed by taking the average latency of
  all ops from a single task, then taking the minimum of that
  between all tasks.

- IOPS is computed by taking the total number of ops across all
  tasks divided by the total access time to execute those ops.

Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
 2019-09-10 18:49:32 +00:00
Julian Kunkel bcd449c360
Merge pull request #186 from daos-stack/daos-devel 
add break that was accidentally removed earlier
 2019-09-10 15:14:11 +01:00
Mohamad Chaarawi c58ba8ffb5 add break that was accidentally removed 
Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
 2019-09-10 14:11:55 +00:00
Julian Kunkel a301baecce
Merge pull request #185 from daos-stack/daos-devel 
Add DAOS based drivers (DAOS Array & DFS)
 2019-09-10 15:01:26 +01:00
Mohamad Chaarawi fe9d76ddf3 fix segfault when no API is specified to mdtest 
Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
 2019-09-09 22:03:55 +00:00
Mohamad Chaarawi 73dbda09c6 remove printf added 
Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
 2019-09-09 20:19:42 +00:00
Mohamad Chaarawi 5622aabf46 missed Makefile.am update 
Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
 2019-09-09 20:14:12 +00:00
Mohamad Chaarawi d332d586bf remove uneeded code and doc 
Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
 2019-09-09 20:07:55 +00:00
Mohamad Chaarawi e9dd5fe15e Merge branch 'master' into daos-devel 
Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>

Conflicts:
	configure.ac
	src/Makefile.am
	src/aiori-MPIIO.c
	src/aiori.c
	src/aiori.h
	src/ior.c
	src/mdtest.c
	src/option.c
 2019-09-09 19:55:56 +00:00
Mohamad Chaarawi 57a16ddda8 - update debugging error checking in DFS. 
- remove usleep() before daos_fini()
- fix README

Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
 2019-09-09 19:14:35 +00:00
Julian Kunkel 0921556456
Merge pull request #184 from hpc/feature-aiori 
Feature aiori
 2019-09-09 15:20:43 +01:00
Julian M. Kunkel c83edfe39b Extracted check function into aiori. #24. #177 2019-09-01 15:59:52 +01:00
Julian Kunkel ced9b0183f
Merge pull request #172 from hpc/fix-168 
Fix #168
 2019-09-01 15:51:44 +01:00
Julian Kunkel 151102ff8f
Merge pull request #176 from otatebe/master 
abstract I/O interface for Gfarm file system
 2019-09-01 15:51:16 +01:00
Julian M. Kunkel e3db1759b2 Moded sync() to aiori backend. 2019-09-01 15:47:42 +01:00
Julian M. Kunkel 6de1ea3176 Merge branch 'feature-sync' into feature-aiori 2019-09-01 15:39:49 +01:00
Julian M. Kunkel 60a641f911 sync help corrected. 2019-09-01 15:29:12 +01:00
Julian M. Kunkel 10d3db1dc8 MDTest: fixing the memset() to account for the number of iterations. 2019-08-31 17:28:08 +01:00
Julian Kunkel 47695aea49
Merge pull request #180 from jschwartz-cray/fix-179 
Fix #179.
 2019-08-31 10:32:41 +01:00
Julian Kunkel 11fa33fc9f
Merge pull request #178 from jschwartz-cray/more-debug 
Added some extra debug.
 2019-08-31 10:30:33 +01:00
Josh Schwartz 4c3d96bfed Fix #179. 
-u (uniqueDir) will once again use the full file path specified by the
client instead of truncating it.  This was caused by a broken sprintf
which was trying to read/write overlapping buffers.

From the glibc sprintf() documentation:
"The behavior of this function is undefined if copying takes place
between objects that overlap"
 2019-08-30 15:31:23 -06:00
Josh Schwartz 0bd979637e Added some extra debug including ERRF, WARNF, and MPI_CHECKF format string macros. 2019-08-30 15:11:25 -06:00
Mohamad Chaarawi 0b809b36e2 fix README_DAOS for DFS plugin 
Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
 2019-08-30 20:35:15 +00:00
Mohamad Chaarawi 32db1cd902 add timing for container close. 
Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
 2019-08-29 03:24:48 +00:00
Mohamad Chaarawi 93730771fd add some verbose messages on finalize routines for DAOS and DFS drivers. 
Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
 2019-08-28 17:01:51 +00:00
Julian M. Kunkel 4df051bf28 New option -Y to invoke the sync command. 2019-08-26 18:57:14 +01:00
Julian M. Kunkel a4068be551 Improved help for fsync. 2019-08-26 15:57:13 +01:00
Julian M. Kunkel 0d9f46e980 MDTest re-added the -Z option for compatibility (for now) and switched back behavior. 2019-08-15 16:49:46 +01:00
Julian M. Kunkel de3baf8861 MDTest: Document choice of 42. 2019-08-15 16:21:30 +01:00
Mohamad Chaarawi b3663bd29a add sleep depending on MPI rank to avoid all ranks calling daos_fini() 
at once (issue with PSM2).

Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
 2019-08-14 13:32:51 +00:00
Mohamad Chaarawi 1320aa279c add some barriers before cont close and destroy to make sure all 
ranks are done.

Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
 2019-08-12 16:04:20 +00:00
Mohamad Chaarawi 8cb878507e Add dfs chunk_size and oclass options. 
update dfs_remove for API change.

Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
 2019-08-12 14:25:05 +00:00
Julian Kunkel 9464fa79f2
Merge pull request #173 from ax3l/fix-earlyFree 
Fix Last Free
 2019-08-10 16:31:22 +01:00
Axel Huebl 70e8b13d1d
Fix Last Free 2019-08-04 18:27:20 -05:00
Julian Kunkel da5f091afc
Merge pull request #169 from ax3l/fix-singleRankHeapBufferOverflow 
Fix: Heap Buffer Overflow
 2019-08-03 09:20:15 +01:00
Julian Kunkel 5e6a03442f
Merge pull request #170 from ax3l/fix-someMemleaks 
Fix Some Memory Leaks; Thanks.
 2019-08-03 09:19:08 +01:00
Julian Kunkel b49b21a301
Merge pull request #167 from hpc/feature-verify-mdtest 
Feature verify mdtest
 2019-08-03 09:17:35 +01:00
Julian M. Kunkel 361a3261d1 Updated test patterns 2019-08-03 09:15:34 +01:00
Julian M. Kunkel c4ff3d7c4e Trivial fix for #168 2019-08-03 09:12:48 +01:00
Mohamad Chaarawi f16ef9ace5 update dfs_lookup() call for extra parameter. 
Signed-off-by: Mohamad Chaarawi <mohamad.chaarawi@intel.com>
 2019-08-03 05:07:13 +00:00
Axel Huebl b72b51be48
Fix: Heap Buffer Overflow 
Fix a memory violation when run in serial.
 2019-08-02 23:34:13 -05:00
Axel Huebl bfff0df8fd
Fix Some Memory Leaks 
Fixing some memory leaks :)
 2019-08-02 23:33:01 -05:00
Glenn K. Lockwood 4b2cd69ef7
Merge pull request #171 from ax3l/fix-ciHDF5 
Travis CI: Fix HDF5 Build
 2019-08-02 22:53:23 -05:00
Axel Huebl f89f338734
Travis CI: Fix HDF5 Build 
Fix the CI.
 2019-08-02 19:35:14 -05:00
Glenn K. Lockwood a0c5dcec89
Merge pull request #166 from hpc/feature-stonewall-perf-report 
Feature stonewall perf report
 2019-08-02 08:38:37 -05:00
Osamu Tatebe b1b66962ac incorrect warning 2019-08-02 13:03:59 +09:00
Julian M. Kunkel cf56715a5a Make sure that each read buffer contains an invalid first byte. 2019-08-01 18:33:44 +01:00
Julian M. Kunkel ce1ae750f6 MDtest: Support to verify the read operation with a default pattern. 2019-08-01 18:29:32 +01:00
Julian M. Kunkel df8355a9bc Added output of mdtest stonewall timer. 2019-08-01 17:57:45 +01:00
Julian M. Kunkel 061b5a860f Backmerged: New option: print rate AND time; improves debugging. 2019-08-01 17:54:11 +01:00